Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833252.1_cds_XP_016505162.1_18528
CDS Infomation

[gene=LOC107823080] [db_xref=GeneID:107823080] [protein=probable E3 ubiquitin-protein ligase XBOS32] [protein_id=XP_016505162.1] [location=complement(join(11003..11517,11974..12065,12200..12340,13432..13478,13577..13635,14974..15134,15228..15403,15550..15621,15907..15966,16083..16301))] [gbkey=CDS]
Sequence

ATGCCCGAACGATATCCGAAAACTATGCGATTTTTGAGCCTTGTTGGGAATTCATTCGGA
TGTTCTGCGTCGGGCGAGCGATTAGTTTCTGCTGCTAGAGATGGTGATCTCCAAGAAGCC
AAGGCTTTACTGGAGTATAATCCTCGCTTAGTGAGGTATTCGACATTTGGTGTTCGAAAT
TCACCCCTCCATTACTCTGCCGCCCAAGGACATCATGAGATTGTTACTCTCTTGCTTGAG
TCTGGAGTTGACATCAATCTCAGAAACTACCGGGGGCAGACTGCGTTGATGCAAGCGTGT
CAGTATGGTCACTGGGAAGTTGTTCAGAGTCTCATTCTTTTCAAAGCCAATATTCATAGG
GCTGATTATCTCAATGGAGGTACGGCACTTCATTTAGCTGCTCTGAATGGACATTCCCGA
TGTATACGGCTTCTCCTTGCTGATTATATTCCAAGCATTCCTAATTTCTGTAATGTCATG
AGAAAGAGATCGAGAAATGAGGACTCTATACAAGAATTTGATGACTTTGCACTGCATGAG
GTGATCAATAGACCTGCCGATGGTGGCATTACTGCCCTTCATATGGCAGCGCTGAACGGC
CATGTTGAAAGTCTGCAGCTACTCTTGGACTTAGGGGCTTCCGTCACTAAGGTTACTGTG
GAAGATGGGACTACAATTGATTTGATAGGTGCAGGAAGTACACCACTTCATTATGCTGCA
TGTGGCGGGAATGCTCAGTGTTGTCAGCTTTTAATTGCCAGGGGTGCGAGTCTCAACGCA
GAAAATGCGAATGGGTGGACCCCATTGATGGTTGCTCGATCATGGCATAGAGATGGGCTC
GAGGAAATTTTAAGTGCTCGTCCAGAAAGGCAACCACGTCCTCTTCCTTCACCGTTCTTA
TGCCTCCCTCTTATGAGTATAGTGAAGATTGCTAGAGAATGTGGATGGAGAACAAATGAT
TCGCCATCAACTTGTTTAGATCCTTGTGTTGTTTGTCTGGAAAGGAAGTGTGCAGTCGCT
GCAGAGGGTTGTTTTCATGAGTTCTGCACACGCTGTGCGTTGTACCTATGTTCCACCAGC
AGCACCTCAACCGCGGCACATGGTCCTCCGGGCTCGATTCCCTGCCCTTTATGCCGACAT
GGCATCGTTTCATTCATTAAGCTGGCGGATACAACGCCAATCATCAAGGAAGCAGCGAGA
ACAAGCCTATCATTGCCGTTCTGTGCATGTACAGCTGATGGACAAGAACCAACTACATTG
GAAACGCCATTTTGCAAGCCGGATTTATATTGCTCTCGATTCTCCCCACTTGGCTCTTCC
TTCCGCTCATTAAGCTGTCAAAAATTCCCGGCCTTGAAATTCAGCCCTGGCCTTTGTATG
GGAACGTCGGACACAAGTCCGTCTTTAGTTCCAATAACCGCTGAACGAGAACATCTGACT
CGATGTTCAAGATCCAGCTTTAGGCGATCAACGTCAAACGTTGAAGCTAGAAGATGGTTG
TGTTCCTTCAGCCAATCTGTAGAAACTGGAAGCAGCTGCTGA

Peptide Sequence

PEP ID

XP_016505162.1
PEP Infomation

PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Nicotiana tabacum]
Sequence

MPERYPKTMRFLSLVGNSFGCSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRN
SPLHYSAAQGHHEIVTLLLESGVDINLRNYRGQTALMQACQYGHWEVVQSLILFKANIHR
ADYLNGGTALHLAALNGHSRCIRLLLADYIPSIPNFCNVMRKRSRNEDSIQEFDDFALHE
VINRPADGGITALHMAALNGHVESLQLLLDLGASVTKVTVEDGTTIDLIGAGSTPLHYAA
CGGNAQCCQLLIARGASLNAENANGWTPLMVARSWHRDGLEEILSARPERQPRPLPSPFL
CLPLMSIVKIARECGWRTNDSPSTCLDPCVVCLERKCAVAAEGCFHEFCTRCALYLCSTS
STSTAAHGPPGSIPCPLCRHGIVSFIKLADTTPIIKEAARTSLSLPFCACTADGQEPTTL
ETPFCKPDLYCSRFSPLGSSFRSLSCQKFPALKFSPGLCMGTSDTSPSLVPITAEREHLT
RCSRSSFRRSTSNVEARRWLCSFSQSVETGSSC

Transcript Sequence

Gene sequence data has not been registered.